Genomic signature

GScompare
Comparison of oligonucleotide based genomic signatures among sequences
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Comparison of Genomes: Ensembl Genomes database

Genomic signatures: comparison os sequenced genomes

Type of frequencies	Octanucleotides
Statistical procedure	Genomic Signature Distance
Clustering method	UPGMA

Name of sequences (191)

GCA_000009925.1	Bacteroides fragilis YCH46
GCA_000598585.1	Bacteroides fragilis str. 3725 D9(v)
GCA_000218345.1	Bacteroides sp. 2_1_56FAA
GCA_000210835.1	Bacteroides fragilis 638R
GCA_000273095.1	Bacteroides fragilis CL03T00C08
GCA_000273115.1	Bacteroides fragilis CL03T12C07
GCA_000263115.1	Bacteroides fragilis CL07T00C01
GCA_000273155.1	Bacteroides fragilis CL07T12C05
GCA_000598305.1	Bacteroides fragilis str. 3774 T13
GCA_000273135.1	Bacteroides fragilis CL05T12C13
GCA_000273765.1	Bacteroides fragilis CL05T00C42
GCA_000598505.1	Bacteroides fragilis str. DS-208
GCA_000599185.2	Bacteroides fragilis str. 3976T8
GCA_000598205.1	Bacteroides fragilis str. 3988 T1
GCA_000598365.1	Bacteroides fragilis str. 3988T(B)14
GCA_000599025.1	Bacteroides fragilis str. S36L5
GCA_000599125.1	Bacteroides fragilis str. S36L11
GCA_000599345.1	Bacteroides fragilis str. S36L12
GCA_000025985.1	Bacteroides fragilis NCTC 9343
GCA_001580095.1	Bacteroides fragilis (GCA_001580095)
GCA_001580105.1	Bacteroides cellulosilyticus (GCA_001580105)
GCA_001699865.1	Bacteroides fragilis (GCA_001699865)
GCA_000598645.1	Bacteroides fragilis str. J38-1
GCA_000598745.1	Bacteroides fragilis str. S24L26
GCA_000599325.1	Bacteroides fragilis str. S24L34
GCA_000599005.1	Bacteroides fragilis str. S24L15
GCA_001286525.1	Bacteroides fragilis (GCA_001286525)
GCA_000598785.2	Bacteroides fragilis str. I1345
GCA_000598985.1	Bacteroides fragilis str. A7 (UDC12-2)
GCA_000965785.1	Bacteroides fragilis (GCA_000965785)
GCA_000162135.1	Bacteroides sp. 2_1_16
GCA_000598765.2	Bacteroides fragilis str. S38L3
GCA_000599365.1	Bacteroides fragilis str. S38L5
GCA_000724795.1	Bacteroides fragilis (GCA_000724795)
GCA_000599085.1	Bacteroides fragilis str. DS-71
GCA_000598245.1	Bacteroides fragilis str. DS-166
GCA_000599045.1	Bacteroides fragilis str. S6R5
GCA_000599245.1	Bacteroides fragilis str. S6R6
GCA_000599385.1	Bacteroides fragilis str. S6L8
GCA_000601075.2	Bacteroides fragilis str. S6R8
GCA_000599225.1	Bacteroides fragilis str. S6L3
GCA_000598565.1	Bacteroides fragilis str. 3397 N2
GCA_000598925.1	Bacteroides fragilis str. 3397 N3
GCA_000599165.2	Bacteroides fragilis str. 3397 T14
GCA_000598705.1	Bacteroides fragilis str. 1009-4-F #10
GCA_000598865.1	Bacteroides fragilis str. 3-F-2 #6
GCA_000598265.1	Bacteroides fragilis str. 1007-1-F #8
GCA_000598685.2	Bacteroides fragilis str. 1007-1-F #10
GCA_000598885.1	Bacteroides fragilis str. 1007-1-F #9
GCA_000601035.1	Bacteroides fragilis str. 1007-1-F #5
GCA_000599145.2	Bacteroides fragilis str. 1007-1-F #7
GCA_000601095.1	Bacteroides fragilis str. 1007-1-F #6
GCA_000599265.1	Bacteroides fragilis str. 1007-1-F #3
GCA_000598545.2	Bacteroides fragilis str. 1007-1-F #4
GCA_000598525.1	Bacteroides fragilis str. J-143-4
GCA_000598665.1	Bacteroides fragilis str. S23 R14
GCA_000599305.1	Bacteroides fragilis str. S23L24
GCA_000601055.1	Bacteroides fragilis str. S23L17
GCA_000297735.1	Bacteroides fragilis HMW 615
GCA_000598845.1	Bacteroides fragilis str. 3719 A10
GCA_000598145.1	Bacteroides fragilis str. 2-F-2 #7
GCA_000598825.1	Bacteroides fragilis str. 2-F-2 #4
GCA_000598285.1	Bacteroides fragilis str. 2-F-2 #5
GCA_000598425.1	Bacteroides fragilis str. 34-F-2 #13
GCA_000598725.1	Bacteroides fragilis str. 3719 T6
GCA_000598905.1	Bacteroides fragilis str. 20793-3
GCA_000159855.2	Bacteroides sp. 3_2_5
GCA_000598185.2	Bacteroides fragilis str. 3986T(B)10
GCA_000598945.1	Bacteroides fragilis str. 3986 N(B)22
GCA_000598965.1	Bacteroides fragilis str. 3986 T(B)13
GCA_000601115.1	Bacteroides fragilis str. 3986 N3
GCA_000598465.1	Bacteroides fragilis str. 3986 T(B)9
GCA_000598165.1	Bacteroides fragilis str. 3976T7
GCA_000598345.1	Bacteroides fragilis str. 3783N2-1
GCA_000598325.1	Bacteroides fragilis str. 3783N1-2
GCA_000599065.2	Bacteroides fragilis str. 3783N1-6
GCA_000598605.1	Bacteroides fragilis str. 3783N1-8
GCA_000598225.1	Bacteroides fragilis str. 3996 N(B) 6
GCA_000599105.1	Bacteroides fragilis str. S13 L11
GCA_000598385.1	Bacteroides fragilis str. 3998 T(B) 4
GCA_000598485.1	Bacteroides fragilis str. 3998T(B)3
GCA_000598445.1	Bacteroides fragilis str. 3986 N(B)19
GCA_000598805.1	Bacteroides fragilis str. Ds-233
GCA_000599285.2	Bacteroides fragilis str. 1009-4-F #7
GCA_000157015.1	Bacteroides fragilis 3_1_12
GCA_001693695.1	Bacteroides fragilis (GCA_001693695)
GCA_000724665.2	Bacteroides fragilis (GCA_000724665)
GCA_000724805.1	Bacteroides fragilis (GCA_000724805)
GCA_000724815.1	Bacteroides fragilis
GCA_000297695.1	Bacteroides fragilis HMW 610
GCA_000710365.2	Bacteroides fragilis (GCA_000710365)
GCA_000710375.2	Bacteroides fragilis (GCA_000710375)
GCA_000297755.1	Bacteroides fragilis HMW 616
GCA_000598405.1	Bacteroides fragilis str. 3397 T10
GCA_000598625.1	Bacteroides fragilis str. B1 (UDC16-1)
GCA_000599205.1	Bacteroides fragilis str. Korea 419
GCA_000601015.1	Bacteroides fragilis str. S6L5
GCA_000273235.1	Bacteroides salyersiae CL02T12C01
GCA_000381365.1	Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988
GCA_000273175.1	Bacteroides nordii CL02T12C05
GCA_000382465.1	Bacteroides sp. HPS0048
GCA_000011065.1	Bacteroides thetaiotaomicron VPI-5482
GCA_001314975.1	Bacteroides thetaiotaomicron
GCA_000159875.2	Bacteroides sp. 1_1_6
GCA_000162515.1	Bacteroides sp. 1_1_14
GCA_000403155.2	Bacteroides thetaiotaomicron dnLKV9
GCA_001578565.1	Bacteroides thetaiotaomicron (GCA_001578565)
GCA_000154125.1	Bacteroides ovatus ATCC 8483
GCA_000162555.1	Bacteroides sp. 3_1_23
GCA_000218325.1	Bacteroides ovatus 3_8_47FAA
GCA_000273215.1	Bacteroides ovatus CL03T12C18
GCA_000157055.1	Bacteroides sp. 2_2_4
GCA_000178275.1	Bacteroides ovatus SD CMC 3f
GCA_001578575.1	Bacteroides ovatus
GCA_000273195.1	Bacteroides ovatus CL02T12C04
GCA_000699665.1	Bacteroides ovatus str. 3725 D9 iii
GCA_000699685.1	Bacteroides fragilis str. 3725 D9 ii
GCA_000699725.1	Bacteroides ovatus str. 3725 D1 iv
GCA_000157095.2	Bacteroides sp. D1
GCA_000162155.1	Bacteroides sp. 2_1_22
GCA_000178215.1	Bacteroides xylanisolvens SD CC 1b
GCA_000178295.1	Bacteroides xylanisolvens SD CC 2a
GCA_000577955.1	Bacteroides xylanisolvens SD CC 2a (GCA_000577955)
GCA_000577295.1	Bacteroides xylanisolvens SD CC 1b (GCA_000577295)
GCA_000210075.1	Bacteroides xylanisolvens XB1A
GCA_000163675.1	Bacteroides sp. D22
GCA_000218365.1	Bacteroides sp. 1_1_30
GCA_000273315.1	Bacteroides xylanisolvens CL03T12C04
GCA_001185845.1	Bacteroides sp. 3_1_13
GCA_000159075.2	Bacteroides sp. D2
GCA_000156195.1	Bacteroides finegoldii DSM 17565
GCA_000304195.1	Bacteroides finegoldii CL09T03C10
GCA_001688725.1	Bacteroides caecimuris
GCA_000169015.1	Bacteroides caccae ATCC 43185
GCA_000273725.1	Bacteroides caccae CL03T12C61
GCA_000158035.1	Bacteroides cellulosilyticus DSM 14838
GCA_001318345.1	Bacteroides cellulosilyticus
GCA_001535595.1	Bacteroides cellulosilyticus (GCA_001535595)
GCA_001578635.1	Bacteroides intestinalis
GCA_000273015.1	Bacteroides cellulosilyticus CL02T12C19
GCA_000172175.1	Bacteroides intestinalis DSM 17393
GCA_000315485.1	Bacteroides oleiciplenus YIT 12058
GCA_000012825.1	Bacteroides vulgatus ATCC 8482
GCA_000178195.1	Bacteroides vulgatus PC510
GCA_000403235.2	Bacteroides vulgatus dnLKV7
GCA_001412315.1	Bacteroides vulgatus
GCA_000699705.1	Bacteroides vulgatus str. 3775 SL(B) 10 (iv)
GCA_000699845.1	Bacteroides vulgatus str. 3775 SR(B) 19
GCA_000158515.2	Bacteroides sp. 4_3_47FAA
GCA_000186105.1	Bacteroides sp. 3_1_40A
GCA_000273295.1	Bacteroides vulgatus CL09T03C04
GCA_000699865.1	Bacteroides vulgatus str. 3975 RP4
GCA_000156075.1	Bacteroides dorei DSM 17855
GCA_000162195.1	Bacteroides sp. 3_1_33FAA
GCA_000158335.2	Bacteroides dorei 5_1_36/D4
GCA_000273075.1	Bacteroides dorei CL03T12C01
GCA_000157075.2	Bacteroides sp. 9_1_42FAA
GCA_000273035.1	Bacteroides dorei CL02T00C15
GCA_000273055.1	Bacteroides dorei CL02T12C06
GCA_000403195.2	Bacteroides massiliensis dnLKV3
GCA_000382445.1	Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223
GCA_000154845.1	Bacteroides coprocola DSM 17136
GCA_000157915.1	Bacteroides coprophilus DSM 18228 = JCM 13818
GCA_000187895.1	Bacteroides plebeius DSM 17135
GCA_000517545.1	Bacteroides reticulotermitis JCM 10512
GCA_000613825.1	Bacteroides graminisolvens DSM 19988 = JCM 15093
GCA_000154205.1	Bacteroides uniformis ATCC 8492
GCA_000185585.1	Bacteroides sp. 4_1_36
GCA_000162215.1	Bacteroides sp. D20
GCA_000699825.1	Bacteroides uniformis str. 3978 T3 ii
GCA_000699885.1	Bacteroides uniformis str. 3978 T3 i
GCA_000273275.1	Bacteroides uniformis CL03T12C37
GCA_000273785.1	Bacteroides uniformis CL03T00C23
GCA_001578555.1	Bacteroides uniformis
GCA_000403175.2	Bacteroides uniformis dnLKV2
GCA_000195635.1	Bacteroides fluxus YIT 12057
GCA_000155815.1	Bacteroides eggerthii DSM 20697
GCA_000185605.1	Bacteroides eggerthii 1_2_48FAA
GCA_000186225.1	Bacteroides helcogenes P 36-108
GCA_000154525.1	Bacteroides stercoris ATCC 43183
GCA_000413395.1	Bacteroides stercoris CC31F
GCA_001535605.1	Bacteroides stercoris
GCA_000195615.1	Bacteroides clarus YIT 12056
GCA_000466505.1	Bacteroides pyogenes F0041
GCA_000511775.1	Bacteroides pyogenes JCM 10003
GCA_000511735.1	Bacteroides pyogenes JCM 6292
GCA_000511755.1	Bacteroides pyogenes DSM 20611 = JCM 6294
GCA_000190575.1	Bacteroides salanitronis DSM 18170
GCA_000162175.1	Bacteroides sp. 2_1_33B
GCA_000163655.1	Bacteroides sp. 3_1_19
GCA_000212915.1	Bacteroides coprosuis DSM 18011

Show only the dendrogram for: Bacteroides cellulosilyticus Bacteroides dorei Bacteroides fragilis Bacteroides ovatus Bacteroides uniformis Bacteroides vulgatus Bacteroides xylanisolvens